BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002F03SP1|AL424992
(972 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1493 1864 0.0
>3x_Contig1493
Length = 12243
Score = 1864 bits (934), Expect = 0.0
Identities = 952/964 (98%)
Strand = Plus / Minus
Query: 1 attggtaaatmaagatccgaacagagaaaaaatggtaacgggaggtctcgagacaaagaa 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9387 attggtaaataaagatccgaacagagaaaaaatggtaacgggaggtctcgagacaaagaa 9328
Query: 61 tctctaacctatctcattttgtaggttaaagcgtttctacgggccttactgtgcgcatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9327 tctctaacctatctcattttgtaggttaaagcgtttctacgggccttactgtgcgcatgt 9268
Query: 121 ttttctaccttcgagggataggtttttttttgattctctgcmacgattacaccgaacmgg 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 9267 ttttctaccttcgagggataggtttttttttgattctctgcaacgattacaccgaacagg 9208
Query: 181 gtgctgccgcaccctgtaattcccaaammacatccaattagaatggaatcggaattgtga 240
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 9207 gtgctgccgcaccctgtaattcccaaaaaacatccaattagaatggaatcggaattgtga 9148
Query: 241 atctgtttaggaggttcgaacctcagaagamaacgcagttcgatccaaaatcactttcat 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 9147 atctgtttaggaggttcgaacctcagaagaaaacgcagttcgatccaaaatcactttcat 9088
Query: 301 gtcccacctgcmagttcttacattcgcattttctggttgctacggagcmacgcacatgtc 360
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 9087 gtcccacctgcaagttcttacattcgcattttctggttgctacggagcaacgcacatgtc 9028
Query: 361 tcgttagtgattcatgctgactttgtatgtggtgagtgggtgtttcgttcggggtgtttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9027 tcgttagtgattcatgctgactttgtatgtggtgagtgggtgtttcgttcggggtgtttt 8968
Query: 421 tgccacctattgcgttcgtcatattttcaagcacaccccacaaatcggtttgcaaaaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8967 tgccacctattgcgttcgtcatattttcaagcacaccccacaaatcggtttgcaaaaacc 8908
Query: 481 cctttttctaaatggtcagtcgttttttttgtttctattttcttccatttttacaatcgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8907 cctttttctaaatggtcagtcgttttttttgtttctattttcttccatttttacaatcgg 8848
Query: 541 atctgggagtaggaacaacggaatagaaccacagtgtcaacaggttcaatgtcatttttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8847 atctgggagtaggaacaacggaatagaaccacagtgtcaacaggttcaatgtcatttttt 8788
Query: 601 caagtcatttttctacgttaagccgttgttatccttttcaaagtacgaagtccgggtggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8787 caagtcatttttctacgttaagccgttgttatccttttcaaagtacgaagtccgggtggc 8728
Query: 661 ctttatgccaaattatcagggtaacacttttcttatttctcgaggaaagtgtcaggtaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8727 ctttatgccaaattatcagggtaacacttttcttatttctcgaggaaagtgtcaggtaaa 8668
Query: 721 gtgacaacgagtcttgtagaggaaatcctgtcatcaaagcgtgtacgtgcgtagtttgcc 780
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 8667 gtgacaacgagtcttgtagaggaaatcctgtcatcaaagcgtgtacgtgcgttgtttgcc 8608
Query: 781 tggttgtgttctaattatcatcgtgaggaaagtgaagcaggatttatattctctatgtgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8607 tggttgtgttctaattatcatcgtgaggaaagtgaagcaggatttatattctctatgtgc 8548
Query: 841 tgttttatatatcaagtgtktcactaaaaaaactggtataagggaggcaaatgaacacgt 900
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 8547 tgttttatatatcaagtgtttcactaaaaaaactggtataagggaggcaaatgaacacgt 8488
Query: 901 agggggttgtagaagactcaattaggtgagtctttacactactgcttaatcatacactgg 960
|| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8487 agtggggtgtagaagactcaattaggtgagtctttacactactgcttaatcatacactgg 8428
Query: 961 ggaa 964
||||
Sbjct: 8427 ggaa 8424
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6432
Number of Sequences: 1807
Number of extensions: 6432
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 972
length of database: 10,358,551
effective HSP length: 16
effective length of query: 956
effective length of database: 10,329,639
effective search space: 9875134884
effective search space used: 9875134884
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)